The detailed information of tRNA gene sequence


Sequence ID>SRA1004331
Genome IDSRR002328.281905
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 162
End posion on genome 86
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacccaccaa
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAA
TCCTATCCCCGCAACCA
Downstream region at tRNA end position 
aataataaac
Secondary structure (Cloverleaf model)
>SRA1004331	Met	CAT
                   a      ACCA aataataaac
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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