The detailed information of tRNA gene sequence


Sequence ID>SRA1004332
Genome IDSRR002328.282087
Search identical group
Phylum/ClassThe Glacier Ice Metagenome Of The Northern Schneeferner (SRP000240)
Species
Start position on genome 53
End posion on genome 145
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatggttaac
tRNA gene sequence 
GGAGACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATACGGTGATGAGCT
GTATCAAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
ggacttacaa
Secondary structure (Cloverleaf model)
>SRA1004332	Ser	GCT
                   c      GCCA ggacttacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       A A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATACGGTGATGAGCTGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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