The detailed information of tRNA gene sequence


Sequence ID>SRA1004343
Genome IDSRR006906.3401
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 36
End posion on genome 109
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atattgatgt
tRNA gene sequence 
GGCGCGATAGCAAAATGGTTATGCAGCGGCCTGCAAAGCCGTAGACGCCAGTTCGATTCT
GGCTCGCGCCTCCA
Downstream region at tRNA end position 
cttattagta
Secondary structure (Cloverleaf model)
>SRA1004343	Cys	GCA
                   t      TCCA cttattagta
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T T
                    T     C G G T C     A
        A A        A      | | | | |     G
      T     A A C G       G C C A G     C
      G       | | |                 T T
      G     A T G C
        T T        A     AGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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