The detailed information of tRNA gene sequence


Sequence ID>SRA1004357
Genome IDSRR006906.9404
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 180
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
naaaaaagat
tRNA gene sequence 
GGCTACGTAGCTCAGTTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGA
ATCCCGTCGTAGCCACCA
Downstream region at tRNA end position 
tctttttttg
Secondary structure (Cloverleaf model)
>SRA1004357	Met	CAT
                   t      ACCA tctttttttg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T T G A        A      | |   | |     G
  T         C T C G       A C A G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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