The detailed information of tRNA gene sequence


Sequence ID>SRA1004359
Genome IDSRR006906.9820
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 85
End posion on genome 159
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ataaaattac
tRNA gene sequence 
GGCTGCGTAGTTCAACTGGATAGAATATCAGATTTCGACTCTGAGGGTTGCAGGTTCGAA
CCCTGTCGCGGCCACtt
Downstream region at tRNA end position 
tacaagacgt
Secondary structure (Cloverleaf model)
>SRA1004359	Arg	TCG
                   c      ACtt tacaagacgt
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C
                     C - G
                     G - C          C A
                    T     T G T C C     A
      C A A        A      + | | | |     G
    T       C T T G       G C A G G     C
    G       | | | +                 T T
    G       G A A T
      A T A        A     GGGTT
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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