The detailed information of tRNA gene sequence


Sequence ID>SRA1004362
Genome IDSRR006906.10896
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 183
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaagat
tRNA gene sequence 
GGCTACGTAGCTCAGTTTGGTTAGAAGCACATCACTCATAATGATGGGGTCACAGGTTCG
AATCCCGTCGTAGCCACCA
Downstream region at tRNA end position 
tctttttttt
Secondary structure (Cloverleaf model)
>SRA1004362	Met	CAT
                   t      ACCA tctttttttt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
    T T G A        A      | |   | |     G
  T         C T C G       A C A G G     C
  G           | | |                 T T
  G         A A G C
    T T A G        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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