The detailed information of tRNA gene sequence


Sequence ID>SRA1004377
Genome IDSRR006906.16502
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 75
End posion on genome 167
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccccgcaaac
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGGCTTATACCC
GCATCGGGGGTTCGAATCCCCCCTTCTCCGCCA
Downstream region at tRNA end position 
ttttgcgccc
Secondary structure (Cloverleaf model)
>SRA1004377	Ser	GCT
                   c      GCCA ttttgcgccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGCTTATACCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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