The detailed information of tRNA gene sequence


Sequence ID>SRA1004378
Genome IDSRR006906.16502
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 172
End posion on genome 248
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
ccgccatttt
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTACCTGGCTACGAACCAGGTGGTCAGAGGTTCGAA
TCCTCTCGGGCGCACCA
Downstream region at tRNA end position 
tntttnnnnn
Secondary structure (Cloverleaf model)
>SRA1004378	Arg	ACG
                   t      ACCA tntttnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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