The detailed information of tRNA gene sequence


Sequence ID>SRA1004380
Genome IDSRR006906.17003
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 21
End posion on genome 108
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcgcccatt
tRNA gene sequence 
GGAAGGATGGCCGAGTGGTTTAAGGCAACGGTCTTGAAAACCGTCGAGTGTAACAGCTCC
CAGAGTTCGAATCTCTGTCCTTCCGCCA
Downstream region at tRNA end position 
aattcagccg
Secondary structure (Cloverleaf model)
>SRA1004380	Ser	TGA
                   t      GCCA aattcagccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     G T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGAGTGTAACAGCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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