The detailed information of tRNA gene sequence


Sequence ID>SRA1004390
Genome IDSRR006906.18117
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 151
End posion on genome 235
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcgatggtat
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTG
GGGGTTCAAGTCCCCCCCTGCACCAaa
Downstream region at tRNA end position 
accncgttga
Secondary structure (Cloverleaf model)
>SRA1004390	Leu	CAG
                   t      CAaa accncgttga
                     G - C
                     C   A
                     G - C
                     A   G
                     A - T
                     G - C
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCCTTACGGACGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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