The detailed information of tRNA gene sequence


Sequence ID>SRA1004403
Genome IDSRR006906.21930
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 31
End posion on genome 107
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position
cgcccgcatt
tRNA gene sequence
CGGTGATTGGCGCAGCCTGGTAGCGCACTTCGTTCGGGACGAAGGGGTCGGAGGTTCGAA
TCCTCTATCACCGACCA
Downstream region at tRNA end position
aattcagaaa
Secondary structure (Cloverleaf model)
>SRA1004403	Pro	CGG
                   t      ACCA aattcagaaa
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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