The detailed information of tRNA gene sequence


Sequence ID>SRA1004405
Genome IDSRR006906.22014
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 50
End posion on genome 137
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgacaatt
tRNA gene sequence 
TGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTAT
CGGGGGTTCGAATCCCCCCTCACCGCCAt
Downstream region at tRNA end position 
atttaaagaa
Secondary structure (Cloverleaf model)
>SRA1004405	Ser	GGA
                   t      CCAt atttaaagaa
                     T + G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    G     C C C C C     A
    T G A G        T      | | | | |     G
  G         C C T G       G G G G G     C
  G         | | |                   T T
  C         G G A G
    T G A A        C     ATACGGCAACGTATC
                    A - T
                    C - G
                    G + T
                    C - G
                    C   T
                  T       G
                  G       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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