The detailed information of tRNA gene sequence


Sequence ID>SRA1004412
Genome IDSRR006906.24653
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 48
End posion on genome 135
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgtcattcc
tRNA gene sequence 
GGAAGTGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCGACCCGAAAGGGTTC
CAGAGTTCGAATCTCTGCGCTTCCGCCA
Downstream region at tRNA end position 
aataagataa
Secondary structure (Cloverleaf model)
>SRA1004412	Ser	TGA
                   c      GCCA aataagataa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     G T C T C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGACCCGAAAGGGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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