The detailed information of tRNA gene sequence


Sequence ID>SRA1004419
Genome IDSRR006906.25891
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 125
End posion on genome 200
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
actacacgat
tRNA gene sequence
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCTGCGGTTCGATC
CCGCATAGCTCCACCA
Downstream region at tRNA end position
tctcgtgagt
Secondary structure (Cloverleaf model)
>SRA1004419	Ala	TGC
                   t      ACCA tctcgtgagt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     A C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       T G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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