The detailed information of tRNA gene sequence


Sequence ID>SRA1004420
Genome IDSRR006906.26118
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 91
End posion on genome 17
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
actgatattt
tRNA gene sequence 
AGGGGCGTCGCCAAGTGGTAAGGCACCGGGTTTTGATCTCGGCATCCGTTGGTTCGAATC
CAGCCGCCCCTGCCA
Downstream region at tRNA end position 
ttacacctgt
Secondary structure (Cloverleaf model)
>SRA1004420	Gln	TTG
                   t      GCCA ttacacctgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G A C C     A
        G A        C      | + | | |     G
      T     A C C G       G T T G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATCC
                    C - G
                    C - G
                    G - C
                    G + T
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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