The detailed information of tRNA gene sequence


Sequence ID>SRA1004428
Genome IDSRR006906.29551
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 246
End posion on genome 172
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ttgtcagcag
tRNA gene sequence 
GCGCCGCTAGCTCAGTTGGTTAGAGCAGCTGACTCTTAATCAGCGGGTCCGGGGTTCGAG
TCCCTGGCGGCGCACgc
Downstream region at tRNA end position 
agagtcaaga
Secondary structure (Cloverleaf model)
>SRA1004428	Lys	CTT
                   g      ACgc agagtcaaga
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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