The detailed information of tRNA gene sequence


Sequence ID>SRA1004430
Genome IDSRR006906.29816
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 172
End posion on genome 88
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctctctctc
tRNA gene sequence 
GGTAGCGTGTCCGAGCGGCCGAAGGAGCTCGCCTCGAAAGCGAGTGTGGGAAACTCACCG
AGGGTTCAAATCCCTCCGCTACCGCtt
Downstream region at tRNA end position 
cgatcgaagg
Secondary structure (Cloverleaf model)
>SRA1004430	Ser	CGA
                   c      GCtt cgatcgaagg
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGTGGGAAACTCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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