The detailed information of tRNA gene sequence


Sequence ID>SRA1004445
Genome IDSRR006906.32391
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ggaatggcgc
tRNA gene sequence
GGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
CCCCGTCCGTTCCGCCA
Downstream region at tRNA end position
ctattcagaa
Secondary structure (Cloverleaf model)
>SRA1004445	Asp	GTC
                   c      GCCA ctattcagaa
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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