The detailed information of tRNA gene sequence


Sequence ID>SRA1004446
Genome IDSRR006906.32831
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtcgcaccga
tRNA gene sequence 
CGGGGTGTGGCGCAGCTTGGTAGCGCGTCCGCTTTGGGAGCGGAAGGCCGTGGGTTCAAA
TCCCGCCACCCCGACCA
Downstream region at tRNA end position 
tgtcgatcac
Secondary structure (Cloverleaf model)
>SRA1004446	Pro	TGG
                   a      ACCA tgtcgatcac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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