The detailed information of tRNA gene sequence


Sequence ID>SRA1004459
Genome IDSRR006906.36647
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 102
End posion on genome 27
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttttctcatg
tRNA gene sequence 
GCGGTTGTGGCGAAGTGGTTAACGCACCGGATTGTGATTCCGGCATTCGAGGGTTCAATT
CCCTTCAGCCGCCCCA
Downstream region at tRNA end position 
ttaaaatttt
Secondary structure (Cloverleaf model)
>SRA1004459	His	GTG
                   g      CCCA ttaaaatttt
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T T
                    T     T T C C C     A
      T G A        G      + | | | |     A
    G       A G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      T A          A     CATTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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