The detailed information of tRNA gene sequence


Sequence ID>SRA1004462
Genome IDSRR006906.38398
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 174
End posion on genome 99
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gatataagct
tRNA gene sequence 
GGGGACTTAGCTTAGTTGGTAGAGCGCCTGCTTTGCACGCAGGAGGTCAGGAGTTCGACT
CTCCTAGTCTCCACCA
Downstream region at tRNA end position 
cgtactttaa
Secondary structure (Cloverleaf model)
>SRA1004462	Ala	TGC
                   t      ACCA cgtactttaa
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     T - A          T C
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       T T C G       A G G A G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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