The detailed information of tRNA gene sequence


Sequence ID>SRA1004464
Genome IDSRR006906.38445
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 110
End posion on genome 35
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tactacatat
tRNA gene sequence 
GGCTTTGTAGCTCAGTTGGTAGAGCAAAGGACTGAAAATCCTTGTGTCGGCGGTTCGATT
CCGTCCAAAGCCACCA
Downstream region at tRNA end position 
tatggtgggg
Secondary structure (Cloverleaf model)
>SRA1004464	Phe	GAA
                   t      ACCA tatggtgggg
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     T - A
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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