The detailed information of tRNA gene sequence


Sequence ID>SRA1004469
Genome IDSRR006906.41382
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 92
End posion on genome 167
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgcggctt
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTCAAAC
CCAACAGGGGCCACCA
Downstream region at tRNA end position 
aattatcaag
Secondary structure (Cloverleaf model)
>SRA1004469	Met	CAT
                   t      ACCA aattatcaag
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     C A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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