The detailed information of tRNA gene sequence


Sequence ID>SRA1004472
Genome IDSRR006906.42039
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 264
End posion on genome 188
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnaatttttt
tRNA gene sequence 
CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAA
TCCTCGATGGCGGACCA
Downstream region at tRNA end position 
gagaaatact
Secondary structure (Cloverleaf model)
>SRA1004472	Arg	TCT
                   t      ACCA gagaaatact
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     G C T C C     A
      C A A        A      | | + | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A A        A     TGGTT
                    C - G
                    G + T
                    G - C
                    A - T
                    G - C
                  C       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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