The detailed information of tRNA gene sequence


Sequence ID>SRA1004476
Genome IDSRR006906.43660
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 56
End posion on genome 132
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
aaacctctac
tRNA gene sequence
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAG
TCCACTCAGGCCTACCA
Downstream region at tRNA end position
aattttccct
Secondary structure (Cloverleaf model)
>SRA1004476	Ile	GAT
                   c      ACCA aattttccct
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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