The detailed information of tRNA gene sequence


Sequence ID>SRA1004484
Genome IDSRR006906.46432
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 113
End posion on genome 38
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
aatatagtgt
tRNA gene sequence
GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATT
CCGGTAGTCGGCACCA
Downstream region at tRNA end position
ttcttttgct
Secondary structure (Cloverleaf model)
>SRA1004484	Thr	TGT
                   t      ACCA ttcttttgct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T T
                    T     T G G C C     A
      T G A        A      | | |   |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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