The detailed information of tRNA gene sequence


Sequence ID>SRA1004488
Genome IDSRR006906.48477
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 194
End posion on genome 268
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
taattaataa
tRNA gene sequence 
TGTCTCGTAGCTCAGCTGGTTAGAGTACTACACTGATAATGTAGGGGTCGACAGTTCGAG
TCTGTCCGAGACAACtt
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1004488	Ile	GAT
                   a      ACtt annnnnnnnn
                     T - A
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C T G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G A C A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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