The detailed information of tRNA gene sequence


Sequence ID>SRA1004499
Genome IDSRR006906.51969
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 51
End posion on genome 126
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gatttcgtgt
tRNA gene sequence 
GCTGATATGGCTCAGTCGGTAGAGCGCATCCTTGGTAAGGATGAGGTCCCCAGTTCGATT
CTGGGTATCAGCACCA
Downstream region at tRNA end position 
tttattcgac
Secondary structure (Cloverleaf model)
>SRA1004499	Thr	GGT
                   t      ACCA tttattcgac
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     G G G T C     A
      T G A        G      | | | | |     G
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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