The detailed information of tRNA gene sequence


Sequence ID>SRA1004502
Genome IDSRR006906.52982
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 179
End posion on genome 104
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnttctttt
tRNA gene sequence 
GCTTCGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGTGGTTCGATT
CCGCCTCGAGGCACCA
Downstream region at tRNA end position 
ttatttggtg
Secondary structure (Cloverleaf model)
>SRA1004502	Phe	GAA
                   t      ACCA ttatttggtg
                     G - C
                     C - G
                     T + G
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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