The detailed information of tRNA gene sequence


Sequence ID>SRA1004506
Genome IDSRR006906.53677
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 187
End posion on genome 111
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tgcaacgcat
tRNA gene sequence 
GCGCTCGTAGCTCAGTTGGATAGAGTACAGGTTTCCGAAGCCTGGGGTCGTGGGTTCGAT
CCCCGCCGAGCGCACCA
Downstream region at tRNA end position 
atattcctta
Secondary structure (Cloverleaf model)
>SRA1004506	Arg	CCG
                   t      ACCA atattcctta
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          C T
                    T     C G C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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