The detailed information of tRNA gene sequence


Sequence ID>SRA1004509
Genome IDSRR006906.55463
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 171
End posion on genome 254
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaaattata
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTAACGGAGCAGATTGCTAATCTGTCGACGGGTAACCTCGCCA
GGGTTCGAGTCCCTGTCTCTCCGCtt
Downstream region at tRNA end position 
tttttgtttc
Secondary structure (Cloverleaf model)
>SRA1004509	Ser	GCT
                   a      GCtt tttttgtttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G G C C       C A G G G     C
      G       | | |                 T T
      G     A C G G
        T A        A     CGACGGGTAACCTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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