The detailed information of tRNA gene sequence


Sequence ID>SRA1004524
Genome IDSRR006906.58764
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 66
End posion on genome 156
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtaaactctc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCTAAGGAGCACGCCTGGAAAGCGTGTATACTCCAAAAGGGT
ATCGAGGGTTCGAATCCCTTCCTCTCCGCAA
Downstream region at tRNA end position 
atttgaaaaa
Secondary structure (Cloverleaf model)
>SRA1004524	Ser	GGA
                   c      GCAA atttgaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C T A        G     TATACTCCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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