The detailed information of tRNA gene sequence


Sequence ID>SRA1004533
Genome IDSRR006906.59634
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 136
End posion on genome 212
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgacgactac
tRNA gene sequence 
GCGCTTGTAGCTCAGCTGGATAGAGCACCCGCCTTCTAAGTGGGTGGTCGTGGGTTCGAG
TCCCGCCAGGCGCGCCA
Downstream region at tRNA end position 
tttaaaagcg
Secondary structure (Cloverleaf model)
>SRA1004533	Arg	TCT
                   c      GCCA tttaaaagcg
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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