The detailed information of tRNA gene sequence


Sequence ID>SRA1004534
Genome IDSRR006906.60369
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 130
End posion on genome 43
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caatacaata
tRNA gene sequence 
TGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTAT
CGGGGGTTCGAATCCCCCCTCACCGCCAt
Downstream region at tRNA end position 
attcaagaaa
Secondary structure (Cloverleaf model)
>SRA1004534	Ser	GGA
                   a      CCAt attcaagaaa
                     T + G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T A
                    G     C C C C C     A
    T G A G        T      | | | | |     G
  G         C C T G       G G G G G     C
  G         | | |                   T T
  C         G G A G
    T G A A        C     ATACGGCAACGTATC
                    A - T
                    C - G
                    G + T
                    C - G
                    C   T
                  T       G
                  G       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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