The detailed information of tRNA gene sequence


Sequence ID>SRA1004538
Genome IDSRR006906.61545
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 79
End posion on genome 166
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgtcgttgc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCAACGGTCTTGAAAACCGTCGACGGGAAACCGTTC
CAGAGTTCGAATCTCTGCTCCTCCGCCA
Downstream region at tRNA end position 
tacattctga
Secondary structure (Cloverleaf model)
>SRA1004538	Ser	TGA
                   c      GCCA tacattctga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     G T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGACGGGAAACCGTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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