The detailed information of tRNA gene sequence


Sequence ID>SRA1004543
Genome IDSRR006906.63840
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgacattgc
tRNA gene sequence 
AGGGGCGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGCGGGTTCGAG
TCCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
cttcttattt
Secondary structure (Cloverleaf model)
>SRA1004543	Trp	CCA
                   c      GCCA cttcttattt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      A A C        A      | | + | |     G
    T       C T T G       G C G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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