The detailed information of tRNA gene sequence


Sequence ID>SRA1004551
Genome IDSRR006906.66958
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 199
End posion on genome 124
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
actcaagact
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCAGTTCGATC
CTGCTTAGCTCCACCA
Downstream region at tRNA end position 
ttcttgaata
Secondary structure (Cloverleaf model)
>SRA1004551	Ala	TGC
                   t      ACCA ttcttgaata
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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