The detailed information of tRNA gene sequence


Sequence ID>SRA1004552
Genome IDSRR006906.66958
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 111
End posion on genome 36
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
cttgaataat
tRNA gene sequence
GGGCGATTAGCTCAGTTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCACTGGTTCGAAC
CCGGTATCGCCCACCA
Downstream region at tRNA end position
tctttaagca
Secondary structure (Cloverleaf model)
>SRA1004552	Val	TAC
                   t      ACCA tctttaagca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     T G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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