The detailed information of tRNA gene sequence


Sequence ID>SRA1004565
Genome IDSRR006906.70013
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 116
End posion on genome 40
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgccccgcat
tRNA gene sequence 
CGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTCGAA
TCCTCTCTCGCCGACCA
Downstream region at tRNA end position 
ccattacgaa
Secondary structure (Cloverleaf model)
>SRA1004565	Pro	TGG
                   t      ACCA ccattacgaa
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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