The detailed information of tRNA gene sequence


Sequence ID>SRA1004570
Genome IDSRR006906.71846
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 111
End posion on genome 27
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aattttacgt
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTTCGCT
GGTTCGAATCCAGCTCCCTCCACCA
Downstream region at tRNA end position 
ctttattctt
Secondary structure (Cloverleaf model)
>SRA1004570	Tyr	GTA
                   t      ACCA ctttattctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G A C C     A
      C G A        T      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCAGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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