The detailed information of tRNA gene sequence


Sequence ID>SRA1004573
Genome IDSRR006906.72483
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 108
End posion on genome 197
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acaacaaaac
tRNA gene sequence 
GGTGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGCGAAAGTGTA
TCGAGGGTTCGAACCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
aattcaaaga
Secondary structure (Cloverleaf model)
>SRA1004573	Ser	GGA
                   c      GCCA aattcaaaga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATACGCGAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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