The detailed information of tRNA gene sequence


Sequence ID>SRA1004577
Genome IDSRR006906.75332
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 170
End posion on genome 246
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttcttatgc
tRNA gene sequence 
AGGGGCGTAGTTCGAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGCGGGTTCGAG
TCCTGCCGCCCCTGCCA
Downstream region at tRNA end position 
tatacctcgt
Secondary structure (Cloverleaf model)
>SRA1004577	Trp	CCA
                   c      GCCA tatacctcgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      A A G        A      | | + | |     G
    T       C T T G       G C G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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