The detailed information of tRNA gene sequence


Sequence ID>SRA1004579
Genome IDSRR006906.75786
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 160
End posion on genome 85
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acgctatcgt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGAGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
aatttccaac
Secondary structure (Cloverleaf model)
>SRA1004579	Ala	GGC
                   t      ACCA aatttccaac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | |                   T T
    G       G A G A
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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