The detailed information of tRNA gene sequence


Sequence ID>SRA1004609
Genome IDSRR006906.83324
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 252
End posion on genome 176
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
nnnnctatga
tRNA gene sequence
GGGCCTATAGCTCAGCCGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTGGTTCGAG
TCCACTTAGGCCCACCA
Downstream region at tRNA end position
tttttatgaa
Secondary structure (Cloverleaf model)
>SRA1004609	Ile	GAT
                   a      ACCA tttttatgaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T C A C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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