The detailed information of tRNA gene sequence


Sequence ID>SRA1004616
Genome IDSRR006906.86394
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 253
End posion on genome 178
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
attcaagagt
tRNA gene sequence 
GCTGATATAGCTCAGGCGGTAGAGCGCATCCTTGGTAAGGATGAGGTCGGCAGTTCGAAT
CTGCCTATCAGCACCA
Downstream region at tRNA end position 
gctctaagca
Secondary structure (Cloverleaf model)
>SRA1004616	Thr	GGT
                   t      ACCA gctctaagca
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C C G T C     A
      G G A        A      | | | | |     G
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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