The detailed information of tRNA gene sequence


Sequence ID>SRA1004618
Genome IDSRR006906.86519
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 132
End posion on genome 56
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnccac
tRNA gene sequence 
GGTCGTTTAGCGTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCACTGGTTCGAG
CCCAGTAACGACCACCA
Downstream region at tRNA end position 
agtttgtaaa
Secondary structure (Cloverleaf model)
>SRA1004618	Val	TAC
                   c      ACCA agtttgtaaa
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     T - A          C G
                    T     T G A C C     A
      G A C        A      | | | | |     G
    C       T G C G       A C T G G     C
    T       +   | |                 T T
    G       G A G C
      G G A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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