The detailed information of tRNA gene sequence


Sequence ID>SRA1004622
Genome IDSRR006906.87507
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 265
End posion on genome 189
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acccacaagt
tRNA gene sequence 
CGGCACGTAGCGCAGCCTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAA
TCCTCTCGTGCCGACCA
Downstream region at tRNA end position 
aaattcctcg
Secondary structure (Cloverleaf model)
>SRA1004622	Pro	GGG
                   t      ACCA aaattcctcg
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T   T
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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