The detailed information of tRNA gene sequence


Sequence ID>SRA1004627
Genome IDSRR006906.88835
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 113
End posion on genome 188
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aatacaattt
tRNA gene sequence 
GGGTTGTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGT
CCAGTACAACCCACCA
Downstream region at tRNA end position 
ctttattatt
Secondary structure (Cloverleaf model)
>SRA1004627	Val	TAC
                   t      ACCA ctttattatt
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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