The detailed information of tRNA gene sequence


Sequence ID>SRA1004630
Genome IDSRR006906.89405
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 97
End posion on genome 185
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaattagcgt
tRNA gene sequence 
GCCCTGGTGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGACTTTCGAGTCGTG
CCGGTTCAAGTCCGGCCCGGGGCCGACCAtat
Downstream region at tRNA end position 
atctactcta
Secondary structure (Cloverleaf model)
>SRA1004630	Leu	TAA
                   t      Atat atctactcta
                     G - C
                     C   C
                     C   A
                     C - G
                     T   C
                     G - C
                     G   G          C G
                    T     G G G C C     G
      T A A        G      + + |         C
    C       A G T G       T T C A A     C
    G         | | |                 G T
    G       A C A C
      T A G        A     CGACTTTCGAGTCGTGCCGG
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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