The detailed information of tRNA gene sequence


Sequence ID>SRA1004636
Genome IDSRR006906.91086
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 205
End posion on genome 130
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccttctcagg
tRNA gene sequence 
GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACT
CCTATTATCGGCACCA
Downstream region at tRNA end position 
tctaaatcaa
Secondary structure (Cloverleaf model)
>SRA1004636	Thr	CGT
                   g      ACCA tctaaatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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